Afni3dFWHM

Afni3dFWHM is a wrapper for the AFNI (RW Cox, NIH) 3dFWHM application.
3dFWHM -- This program estimates the Filter Width Half Maximum (FWHM).
AFNI 3dFWHM was written by B. Douglas Ward, Medical College of Wisconsin.
For more information about the AFNI package, see the AFNI Homepage

To see the AFNI postscript documentation please go here.

To read the help documentation generated from the command line go here.

To learn about afni data types follow this link.

Invocation

java Afni3dFWHM

This starts up the java interpreter and runs the Afni3dFWHM application. You need to have set up your environment for java in order for this to work.

For information on how to invoke the command line program, 3dFWHM, please go here.

Afni3dFWHM window

Information to be entered

Input dataset
This is the filename of the dataset to be analyzed.
Input Sub Brick
If the input file is a 3d+time dataset, this is the sub brick that is used.
Output file
The output will be written to this file if enabled. Otherwise, the output is written to the output window.
Mask dataset
This is the name of the dataset to use as a mask.
Verbose
Enable verbose output.

Last updated Wed Oct 29 15:05:18 EDT 2001