CCNPreProcess

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Synopsis
CCN lab standard fMRI dataset preprocessing (prior to statistical analysis)
Calls: Foreach, SetLogName, UnixCommand, PfileCorrect, SpiralReconLX, Afni3dANALYZEtoAFNI, Afni3dTqual, UnixCommand, Nisthresh, UnixCommand, Nismaps, Nisoverlay, IfisSendMail, EndForeach

Requirements
The flow requires the following software packages to be installed:
- AFNI
- Spiral
- NIS
- Unixstat

Caveats

Citations

AFNI
    RW Cox. AFNI: Software for analysis and visualization of functional magnetic resonance neuroimages. 
    Computers and Biomedical Research, 29:162-173, 1996.
	
    RW Cox and JS Hyde. Software tools for analysis and visualization of FMRI Data. 
    NMR in Biomedicine, 10:171-178, 1997.

Publications

Contact Info
Kate Fissell fissell+@pitt.edu

Step-by-Step Documentation
Step-by-step document

CCNPreProcess

Download / View Flow

Synopsis

Requirements

Caveats

Citations

Publications

Contact Info

Step-by-Step Documentation